CDS

Accession Number TCMCG057C35552
gbkey CDS
Protein Id XP_018437086.1
Location complement(join(40397505..40397687,40397770..40397976,40398074..40398286,40398364..40398412,40398504..40398703,40398787..40398872,40398949..40399105,40399193..40399333,40399705..40399911))
Gene LOC108809443
GeneID 108809443
Organism Raphanus sativus

Protein

Length 480aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018581584.1
Definition PREDICTED: vacuolar-processing enzyme alpha-isozyme isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Vacuolar-processing enzyme
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
KEGG_ko ko:K01369        [VIEW IN KEGG]
EC 3.4.22.34        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04612        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04612        [VIEW IN KEGG]
GOs GO:0000322        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0000326        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004175        [VIEW IN EMBL-EBI]
GO:0004197        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006624        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016485        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051604        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTCCTGTCTCCTCCGTCGTTTCCTTTCTCGCCCTTTTCCTCTCGCTAGTCGTCGTCGTCGTTTCCGGTGACGTCATCAGACTACCTTCGCAAGCTTCTAAGTTCTTCCGTCCAACAGAAGACGACGGCGGTGATTCTTCCGCCGGTACTAAGTGGGCCGTTCTCGTCGCCGGCTCTAGAGGATACTGGAACTACAGGCATCAGCTTCTGAGGAAAGGTGGAGTGAAAGAAGAGAATATTGTGGTGTTCATGTATGATGACATCGCAAAGAACAAAGAGAACCCAAGACCTGGAATCATTATCAACAGTCCTAATGGAGATGATGTTTATAATGGAGTTCCCAAGGATTACACTGGACAGGATGTCAACGTTGATAATTTGTTTGCTGTAATTCTTGGGAATAAAACAGCACTTAAAGGAGGAAGTGGTAAGGTTGTAGATAGTGGTCCAAACGATCATATCTTCATATACTATAGTGATCATGGTGGCCCTGGAGTGCTTGGGATGCCAACTTCTCCGGCTCTATATGCAAACGATCTAAACGATGTACTGAAGAAAAAACATGCTTCTGGAACATACAAGAGCTTGGTGTTTTATCTAGAGGCATGTGAATCTGGAAGCATTTTCGAAGGTCTTTTACCAGAAGGTTTAAACGTTTACGCGACAACTGCAGCGAATGCAGAAGAAAGTAGTTGGGGTACTTATTGTCCTGGAGAGGATACTAGTGTACCGTCTGAGTTTGAGACCTGTTTAGGTGACTTATACAGTGTTGCTTGGATGGAAGATAGTGATAAACACAATTTAGGGACAGAGAGTTTGCACCAGCAATATGAACTGGTGAAGAAGAGGACTGCAGCTACTGCTTCGACTTCTGGTTCTCATGTGATGGAGTTTGGAGATATAGGACTAAGCAAGGAGAAGCTCGTCCTTTACTTGGGCACAAACCCAGACAACGAAAACGCCACCTTTGCCGATAAAAATTCACAACTCCCGCCACTTTCAATAGTCACAAACCAGCGTGATGCGGATCTTGTACATTTCTGGGAGAAGTATAAAAAGGCACCAGAAGGTTCTTCAAGAAAAGCCGAAGCTCAGAAGCAACTCCTTGAAGCAATGTCTCACAGACTTCACGTGGATAGTAGCGTTCTATTAATTGGGAAACTCTTGTTTGGCATTTCAGAAGGTCCTACGGTGCTAAACAAAGTAAGGCCTAATGGAAAACCGCTTGTTGATGACTGGGACTGCCTTAAAACACTGGTGAGAGCTTTTGAGAAGCACTGTGGATCATTGTCTCAGTACGGACTCAAGCACATGAGGTCCATTGCAAACATATGCAACGCTGGGATTCAGATGGAACAGATGGAGGAGGCAGCCATCCAGGCTTGTCCCACTATCCCGACCGGTCCTTGGAGCTCCCTTCACCAAGGATTCAGTGCTTGA
Protein:  
MTPVSSVVSFLALFLSLVVVVVSGDVIRLPSQASKFFRPTEDDGGDSSAGTKWAVLVAGSRGYWNYRHQLLRKGGVKEENIVVFMYDDIAKNKENPRPGIIINSPNGDDVYNGVPKDYTGQDVNVDNLFAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPALYANDLNDVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNVYATTAANAEESSWGTYCPGEDTSVPSEFETCLGDLYSVAWMEDSDKHNLGTESLHQQYELVKKRTAATASTSGSHVMEFGDIGLSKEKLVLYLGTNPDNENATFADKNSQLPPLSIVTNQRDADLVHFWEKYKKAPEGSSRKAEAQKQLLEAMSHRLHVDSSVLLIGKLLFGISEGPTVLNKVRPNGKPLVDDWDCLKTLVRAFEKHCGSLSQYGLKHMRSIANICNAGIQMEQMEEAAIQACPTIPTGPWSSLHQGFSA